Lsat_1_v5_gn_3_46701.1 (NTMC2T1.2,...)


Aliases : NTMC2T1.2, NTMC2TYPE1.2, SYT2, ATSYTB, SYTB

Description : membrane tethering protein (SYT1) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0003278 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003278_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_46701.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_138


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004559 alpha-mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006013 mannose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009678 diphosphate hydrolysis-driven proton transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015036 disulfide oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016229 steroid dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016972 thiol oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019318 hexose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030906 retromer, cargo-selective complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032940 secretion by cell IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042147 retrograde transport, endosome to Golgi IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046903 secretion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0140352 export from cell IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 247
IPR000008 C2_dom 418 520
IPR000008 C2_dom 260 359
No external refs found!