Bra005207 (ATPDR5, PDR5, ABCG33)

Aliases : ATPDR5, PDR5, ABCG33

Description : subfamily ABCG transporter

Gene families : OG0003905 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003905_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra005207
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_264

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008417	fucosyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016409	palmitoyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042546	cell wall biogenesis	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044085	cellular component biogenesis	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	168	352
IPR003439	ABC_transporter-like_ATP-bd	851	1002
IPR043926	ABCG_dom	383	462
IPR043926	ABCG_dom	1032	1100
IPR029481	ABC_trans_N	32	143
IPR013525	ABC2_TM	1148	1361
IPR013525	ABC2_TM	504	715
IPR013581	PDR_assoc	720	782

External Links

No external refs found!