- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : HCF136
Description : protein involved in PS-II assembly *(HCF136)
Gene families : OG0033218 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_35480.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_159 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004019 | adenylosuccinate synthase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004356 | glutamine synthetase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004601 | peroxidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005198 | structural molecule activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005509 | calcium ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005840 | ribosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010206 | photosystem II repair | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015252 | proton channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016209 | antioxidant activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016211 | ammonia ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016853 | isomerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030091 | protein repair | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042440 | pigment metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043603 | amide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051287 | NAD binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051920 | peroxiredoxin activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1990204 | oxidoreductase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028203 | PSII_CF48-like_dom | 93 | 413 |
| No external refs found! |