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  5. Lsat_1_v5_gn_3_14241.1

Lsat_1_v5_gn_3_14241.1 (RPS7, RPS7.1)


Aliases : RPS7, RPS7.1

Description : component *(uS7c) of small plastid ribosomal-subunit proteome


Gene families : OG0000339 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_14241.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0091.00018 RPS7, RPS7.1 component *(uS7c) of small plastid ribosomal-subunit proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0091.00029 RPS7, RPS7.1 component *(uS7c) of small plastid ribosomal-subunit proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0091.00030 RPS7, RPS7.1 component *(uS7c) of small plastid ribosomal-subunit proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0643.00003 RPS7, RPS7.1 component *(uS7c) of small plastid ribosomal-subunit proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0662.00003 RPS7, RPS7.1 component *(uS7c) of small plastid ribosomal-subunit proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01930 RPS7, RPS7.1 component *(uS7c) of small plastid ribosomal-subunit... 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031647 regulation of protein stability IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042301 phosphate ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050821 protein stabilization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR023798 Ribosomal_uS7_dom 1 149
No external refs found!