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  5. Lsat_1_v5_gn_3_125760.1

Lsat_1_v5_gn_3_125760.1 (GLT1, PGLCT)


Aliases : GLT1, PGLCT

Description : M10-class (Matrixin) metalloprotease. EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG0001297 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_125760.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_9_112280.1 MyoB2 EC_3.4 hydrolase acting on peptide bond (peptidase).... 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 131 260
IPR002477 Peptidoglycan-bd-like 13 73
No external refs found!