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  5. Lsat_1_v5_gn_2_87621.1

Lsat_1_v5_gn_2_87621.1


Description : not classified


Gene families : OG0017223 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_87621.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_22


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000786 nucleosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003779 actin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006873 intracellular monoatomic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006874 intracellular calcium ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030003 intracellular monoatomic cation homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032469 endoplasmic reticulum calcium ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050801 monoatomic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055074 calcium ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055080 monoatomic cation homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055082 intracellular chemical homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041337 hnRNP_Q_AcD 339 406
IPR000504 RRM_dom 203 264
IPR000504 RRM_dom 21 89
No external refs found!