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  5. Bra004950

Bra004950 (TMP-A, ATHH2, PIP1;2, PIP1B)


Aliases : TMP-A, ATHH2, PIP1;2, PIP1B

Description : plasma membrane intrinsic protein *(PIP)


Gene families : OG0000536 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra004950
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_258

Target Alias Description ECC score Gene Family Method Actions
Bra039301 TMP-A, ATHH2,... plasma membrane intrinsic protein *(PIP) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_6_87460.1 TMP-A, ATHH2,... plasma membrane intrinsic protein *(PIP) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004568 chitinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004664 prephenate dehydratase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004784 superoxide dismutase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006026 aminoglycan catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030286 dynein complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0052646 alditol phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901071 glucosamine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901135 carbohydrate derivative metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000425 MIP 44 273
No external refs found!