Lsat_1_v5_gn_2_7800.1

Description : component *(mS82) of small mitoribosomal-subunit proteome. protease *(SBT5)

Gene families : OG0043988 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_7800.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_164

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003735	structural constituent of ribosome	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003924	GTPase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004017	adenylate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004743	pyruvate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005488	binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005787	signal peptidase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006302	double-strand break repair	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006465	signal peptide processing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006605	protein targeting	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006612	protein targeting to membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008312	7S RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009892	negative regulation of metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010629	negative regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016485	protein processing	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019843	rRNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030145	manganese ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030955	potassium ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031047	regulatory ncRNA-mediated gene silencing	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0031420	alkali metal ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033365	protein localization to organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043603	amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045047	protein targeting to ER	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0048500	signal recognition particle	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051668	localization within membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072657	protein localization to membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090150	establishment of protein localization to membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0097159	organic cyclic compound binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901363	heterocyclic compound binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000209	Peptidase_S8/S53_dom	255	691
IPR003137	PA_domain	508	577
IPR041469	Subtilisin-like_FN3	764	859
IPR010259	S8pro/Inhibitor_I9	155	226

External Links

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Lsat_1_v5_gn_2_7800.1

Expression Profile

Co-expression Networks

Functional Annotation