Lsat_1_v5_gn_2_75300.1

Description : splicing factor *(SR45a)

Gene families : OG0044925 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_75300.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_132

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004518	nuclease activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004527	exonuclease activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006325	chromatin organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008408	3'-5' exonuclease activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0032993	protein-DNA complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042393	histone binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071824	protein-DNA complex organization	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	62	131

External Links

No external refs found!