Lsat_1_v5_gn_2_68621.1 (ATGSR2, GSR2, GLN1;2)

Aliases : ATGSR2, GSR2, GLN1;2

Description : cytosolic glutamine synthetase *(GLN1). EC_6.3 ligase forming carbon-nitrogen bond

Gene families : OG0043992 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_68621.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_172

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004356	glutamine synthetase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006541	glutamine metabolic process	None	Extended
BP	GO:0006542	glutamine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016211	ammonia ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016880	acid-ammonia (or amide) ligase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003746	translation elongation factor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004177	aminopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004813	alanine-tRNA ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005856	cytoskeleton	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005885	Arp2/3 protein complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006448	regulation of translational elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006449	regulation of translational termination	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006812	monoatomic cation transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007015	actin filament organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008235	metalloexopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009893	positive regulation of metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010628	positive regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016843	amine-lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016844	strictosidine synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016853	isomerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016854	racemase and epimerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018208	peptidyl-proline modification	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030145	manganese ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034248	regulation of amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034250	positive regulation of amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034314	Arp2/3 complex-mediated actin nucleation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043022	ribosome binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045010	actin nucleation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045727	positive regulation of translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045901	positive regulation of translational elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045905	positive regulation of translational termination	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051130	positive regulation of cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0070006	metalloaminopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0097435	supramolecular fiber organization	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0097525	spliceosomal snRNP complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0120114	Sm-like protein family complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR008147	Gln_synt_N	22	97
IPR008146	Gln_synth_cat_dom	168	346

External Links

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Lsat_1_v5_gn_2_68621.1 (ATGSR2, GSR2, GLN1;2)

Expression Profile

Co-expression Networks

Functional Annotation