Lsat_1_v5_gn_2_660.1 (AtIRE1b, ATIRE1-1,...)

Aliases : AtIRE1b, ATIRE1-1, IRE1-1, IRE1B, IRE1

Description : EC_2.7 transferase transferring phosphorus-containing group. IRE bifunctional protein kinase and mRNA endoribonuclease. bifunctional protein kinase and ribonuclease *(IRE1)

Gene families : OG0005578 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005578_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_660.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_191

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004540	RNA nuclease activity	IEA	Interproscan
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003682	chromatin binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006906	vesicle fusion	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007030	Golgi organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009250	glucan biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016050	vesicle organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016579	protein deubiquitination	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016759	cellulose synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030243	cellulose metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030244	cellulose biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030328	prenylcysteine catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030329	prenylcysteine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044042	glucan metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0044877	protein-containing complex binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048280	vesicle fusion with Golgi apparatus	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048284	organelle fusion	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051273	beta-glucan metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070646	protein modification by small protein removal	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0101005	deubiquitinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR010513	KEN_dom	666	792
IPR000719	Prot_kinase_dom	416	660

External Links

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Lsat_1_v5_gn_2_660.1 (AtIRE1b, ATIRE1-1,...)

Expression Profile

Co-expression Networks

Functional Annotation