Lsat_1_v5_gn_2_52260.1 (PDC1, AtPDC1)

Aliases : PDC1, AtPDC1

Description : pyruvate decarboxylase *(PDC). EC_4.1 carbon-carbon lyase

Gene families : OG0001143 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_52260.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_168

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030976	thiamine pyrophosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0050997	quaternary ammonium group binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003993	acid phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004334	fumarylacetoacetase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009072	aromatic amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0009922	fatty acid elongase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016791	phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011766	TPP_enzyme_TPP-bd	450	516
IPR012000	Thiamin_PyroP_enz_cen_dom	240	356
IPR012001	Thiamin_PyroP_enz_TPP-bd_dom	43	211

External Links

No external refs found!