Lsat_1_v5_gn_2_40760.1 (eIFiso4E, EIF(ISO)4E,...)

Aliases : eIFiso4E, EIF(ISO)4E, LSP1, LSP, EIF4E2

Description : component *(eIF-iso4E) of eIF-iso4F unwinding complex

Gene families : OG0017553 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_40760.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_179

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003746	translation elongation factor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005047	signal recognition particle binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005048	signal sequence binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006414	translational elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006605	protein targeting	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006612	protein targeting to membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008312	7S RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0015934	large ribosomal subunit	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033365	protein localization to organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0035145	exon-exon junction complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042277	peptide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043603	amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0044391	ribosomal subunit	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045047	protein targeting to ER	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0048500	signal recognition particle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051668	localization within membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072657	protein localization to membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090150	establishment of protein localization to membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001040	TIF_eIF_4E	21	175

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Lsat_1_v5_gn_2_40760.1 (eIFiso4E, EIF(ISO)4E,...)

Expression Profile

Co-expression Networks

Functional Annotation