Bra004800


Description : mTERF mitochondrial RNA splicing factor. mTERF-type transcription factor


Gene families : OG0020506 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra004800
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_151


Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042274 ribosomal small subunit biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0090730 Las1 complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902555 endoribonuclease complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905348 endonuclease complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003690 MTERF 84 392
No external refs found!