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  5. Lsat_1_v5_gn_2_123281.1

Lsat_1_v5_gn_2_123281.1 (AtCAT1, CAT1, AAT1)


Aliases : AtCAT1, CAT1, AAT1

Description : cationic amino acid transporter *(CAT)


Gene families : OG0002479 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_123281.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_60


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006544 glycine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006546 glycine catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009063 amino acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009071 serine family amino acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0120009 intermembrane lipid transfer IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0120013 lipid transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 178 580
IPR029485 CAT_C 617 666
No external refs found!