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Aliases : ATL40
Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG0006226 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra004686 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_190 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0003006 | developmental process involved in reproduction | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004061 | arylformamidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004568 | chitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004601 | peroxidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004650 | polygalacturonase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005507 | copper ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006030 | chitin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006032 | chitin catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006568 | tryptophan metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006569 | tryptophan catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006576 | biogenic amine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006950 | response to stress | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006979 | response to oxidative stress | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008061 | chitin binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009063 | amino acid catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009074 | aromatic amino acid family catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009607 | response to biotic stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009617 | response to bacterium | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009620 | response to fungus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009790 | embryo development | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016054 | organic acid catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016209 | antioxidant activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019441 | tryptophan catabolic process to kynurenine | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0020037 | heme binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022414 | reproductive process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0031012 | extracellular matrix | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042436 | indole-containing compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042537 | benzene-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042742 | defense response to bacterium | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044282 | small molecule catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0050832 | defense response to fungus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0050896 | response to stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051707 | response to other organism | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070189 | kynurenine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0098542 | defense response to other organism | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140359 | ABC-type transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 104 | 147 |
| No external refs found! |