Aliases : PKDM7D, JMJ16
Description : histone demethylase *(PKDM7)
Gene families : OG0004856 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004856_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_108161.1 | |
Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_18 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0000502 | proteasome complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0003674 | molecular_function | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0003676 | nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0005515 | protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0005516 | calmodulin binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0005681 | spliceosomal complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0006886 | intracellular protein transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0008104 | protein localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0008312 | 7S RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0009250 | glucan biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0009893 | positive regulation of metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0009894 | regulation of catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0010921 | regulation of phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0015031 | protein transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0016192 | vesicle-mediated transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0016579 | protein deubiquitination | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0019899 | enzyme binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0019902 | phosphatase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0019903 | protein phosphatase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0032784 | regulation of DNA-templated transcription elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0032786 | positive regulation of DNA-templated transcription, elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0032991 | protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0033036 | macromolecule localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0034243 | regulation of transcription elongation by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0035303 | regulation of dephosphorylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0042176 | regulation of protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0042393 | histone binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0043687 | post-translational protein modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0044042 | glucan metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0045184 | establishment of protein localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0045944 | positive regulation of transcription by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0046527 | glucosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0046907 | intracellular transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0048500 | signal recognition particle | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0048522 | positive regulation of cellular process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0051246 | regulation of protein metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0051336 | regulation of hydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0051641 | cellular localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0051649 | establishment of localization in cell | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0070569 | uridylyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0070646 | protein modification by small protein removal | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0070727 | cellular macromolecule localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0071702 | organic substance transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0071705 | nitrogen compound transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0098796 | membrane protein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0098797 | plasma membrane protein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0101005 | deubiquitinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:1902494 | catalytic complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:1905368 | peptidase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:1905369 | endopeptidase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:1990234 | transferase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
No external refs found! |