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  5. Lsat_1_v5_gn_2_106540.1

Lsat_1_v5_gn_2_106540.1 (PAL1, ATPAL1)


Aliases : PAL1, ATPAL1

Description : phenylalanine ammonia lyase *(PAL). EC_4.3 carbon-nitrogen lyase


Gene families : OG0001949 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001949_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_106540.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_2_106520.1 PAL1, ATPAL1 EC_4.3 carbon-nitrogen lyase. phenylalanine ammonia lyase *(PAL) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_6_31000.1 PAL2, ATPAL2 phenylalanine ammonia lyase *(PAL). EC_4.3 carbon-nitrogen lyase 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 63 537
No external refs found!