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  5. Bra004617

Bra004617 (BOP2)


Aliases : BOP2

Description : not classified


Gene families : OG0001461 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra004617
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr4.00593 BOP2 transcriptional co-activator *(BOP) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamine synthetase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005337 nucleoside transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008131 primary amine oxidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015858 nucleoside transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901642 nucleoside transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 99 181
IPR024228 NPR_central_dom 37 93
No external refs found!