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  5. Lsat_1_v5_gn_1_46661.1

Lsat_1_v5_gn_1_46661.1 (CCD8, ATCCD8, MAX4)


Aliases : CCD8, ATCCD8, MAX4

Description : carotenoid cleavage dioxygenase *(CCD8)


Gene families : OG0003404 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_46661.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_76


Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003779 actin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006633 fatty acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008131 primary amine oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016744 transketolase or transaldolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 77 552
No external refs found!