Heatmap: Cluster_76 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.44 -1.66 -0.99 -0.91 0.87 0.21 -1.16 -1.17 -0.57 -0.32 -0.2 -0.13 0.82 1.52 0.95 0.05 -0.24 0.71 -0.04 -0.35 -0.73 -0.58 -0.69 -0.57 -0.85 -0.46 -0.36 -0.71 0.18 0.28 1.45
-0.24 -0.32 -0.36 -0.37 -0.07 0.33 -0.58 -0.75 -0.54 -0.44 -0.77 -0.31 0.73 1.75 0.8 -0.3 -0.29 0.87 -0.22 -0.53 -0.49 -0.78 -0.88 -0.63 -0.12 -0.52 -0.65 -0.96 0.28 0.35 0.99
-0.09 -0.27 -0.6 -0.51 -0.25 -0.24 -0.64 -0.88 -0.65 -1.09 -0.16 0.2 1.48 1.66 0.47 -0.81 -0.08 0.78 -0.58 -0.97 -0.52 -0.65 0.19 -0.51 -0.68 -1.19 -0.58 -0.83 -0.36 0.05 1.49
-0.11 -0.21 0.53 0.35 0.41 0.18 -0.82 -1.15 -0.72 -0.43 -0.69 -0.74 0.58 1.82 0.95 -0.25 -0.78 0.93 -0.54 -0.76 -0.76 -0.37 0.74 -1.04 -1.05 -0.54 -0.65 -0.94 -0.42 -0.48 0.67
-0.68 -1.41 -0.99 -1.18 -0.43 0.16 -0.25 -0.93 -1.03 -0.74 -0.61 -0.39 0.99 1.99 0.85 -0.36 -0.52 0.49 -0.41 -0.52 -0.16 0.06 0.3 -0.1 -0.0 -0.23 -0.35 0.14 0.06 -0.08 0.5
- -2.11 -3.7 -2.1 -3.12 -3.96 -0.48 -2.43 -3.05 -1.52 -1.67 -4.2 1.99 2.77 2.1 -0.18 -0.19 1.0 -1.35 0.29 -1.03 -2.91 - -1.77 -0.64 -1.87 -0.85 -3.08 -0.49 -1.26 2.15
-1.8 -1.93 -1.7 -1.27 -0.86 -0.75 -0.46 -0.49 -0.1 -0.01 0.05 -0.04 0.63 1.26 0.62 -0.37 -0.23 1.02 0.0 0.15 -0.18 -0.53 -0.32 0.36 0.21 -0.32 -0.42 -0.14 0.47 0.46 0.96
-1.62 -2.39 -2.28 -0.98 -0.65 -0.6 -0.85 -0.9 -0.08 0.12 0.13 -0.0 0.48 1.41 0.37 -0.75 -0.04 1.18 -0.22 0.21 -0.29 -0.99 -0.28 0.37 0.25 -0.89 -0.42 -0.01 0.56 0.6 1.12
-0.93 -0.98 -1.7 -1.79 0.1 0.34 -0.51 -0.87 -1.0 -0.75 -0.7 -0.52 1.99 1.6 0.62 -0.46 -0.17 0.51 -0.36 -0.47 -0.71 -0.34 -2.44 0.03 0.13 -0.2 -0.18 -0.1 -0.82 -0.67 1.45
-0.44 -0.02 -0.39 -1.15 -0.37 0.35 -0.11 0.32 -1.11 -1.17 -0.86 -1.03 1.28 1.62 0.8 -0.37 -0.46 1.55 -0.09 -0.76 -0.56 -0.39 -1.08 -0.08 -0.0 -0.56 -0.35 -0.11 -0.24 -0.57 -0.1
-0.55 -0.45 -0.8 -0.29 -0.62 -0.63 -0.1 0.35 0.0 -0.29 -0.4 0.02 0.97 1.06 0.52 -0.59 -0.17 -0.54 0.06 -0.04 -0.14 -0.35 -0.95 0.01 -0.06 0.09 -0.67 -0.09 0.08 0.09 1.28
-2.81 -2.82 -2.74 -2.86 -0.31 -0.21 -2.34 -2.54 -1.21 -0.98 -0.92 -0.96 1.26 2.69 1.63 -0.29 -0.74 1.62 -0.47 -0.71 -1.31 -0.9 -3.43 -0.99 -0.92 -0.92 -1.05 -2.27 -0.69 -0.41 1.98
-1.74 -2.02 -2.68 -1.64 0.58 0.77 -1.35 -1.76 -1.61 -1.55 -0.95 -0.9 1.96 2.06 1.58 -0.58 -0.63 1.14 0.14 -0.75 -0.84 -0.82 -2.12 -0.71 -0.35 -1.5 -1.23 -0.3 -0.63 -0.71 1.31
-2.0 -0.87 -2.41 -2.18 0.26 0.13 -0.35 -0.71 -0.43 -0.32 -0.2 0.12 1.22 1.37 1.25 -0.53 -0.06 0.44 0.55 -0.34 -0.61 -0.4 -1.23 0.03 0.04 -0.18 -0.08 0.27 -1.03 -0.86 1.07
-1.57 -1.11 -2.79 -1.84 -0.5 0.05 0.2 0.65 -0.61 -0.53 -0.27 -0.18 1.57 1.51 0.74 -0.2 -0.32 0.46 -0.14 -0.36 -0.26 -0.22 -2.17 -0.17 -0.3 -0.35 -0.29 -0.98 -0.19 -0.11 1.32
-1.18 -1.39 -0.58 -0.87 -1.81 -0.39 -0.16 0.13 -0.19 -0.07 -0.68 0.17 1.7 1.37 0.75 0.07 0.18 0.35 -0.27 -0.07 -0.19 -0.3 -2.01 -0.58 -0.16 -0.23 -1.07 -0.7 -0.53 -0.45 1.45
-3.84 -1.91 -1.44 -0.98 -1.02 -0.68 -1.07 -0.86 -0.45 -0.55 -0.33 -0.87 1.29 1.87 1.12 -0.4 -0.69 1.87 -0.09 -0.58 -0.85 -1.09 -2.75 -1.11 -0.72 -1.02 -0.79 -1.31 0.26 0.28 1.95
-0.74 -0.73 -1.18 -1.6 0.22 0.27 -0.0 -0.24 -0.26 -0.62 -0.2 -0.43 -0.59 1.21 0.86 0.0 -0.21 1.7 -0.14 -0.15 -0.24 -0.06 0.76 -0.54 -0.54 -0.52 -0.3 -0.22 0.07 -0.13 -0.32
-1.61 -0.86 -1.67 -0.44 0.1 -0.23 -1.22 -0.36 -0.25 -0.95 -0.38 -0.74 1.24 1.6 1.07 -0.21 -0.57 0.76 -0.13 -0.4 -1.15 -0.23 -3.08 -0.19 -0.03 -0.11 -0.15 -0.89 0.12 0.37 1.48
-0.66 -0.1 -0.44 -1.14 -0.08 0.02 -0.48 -0.12 -0.89 -0.64 -0.22 -0.44 1.06 1.33 0.72 0.26 0.09 0.34 0.05 -0.43 -0.45 -0.22 -1.36 -0.37 -0.49 -0.23 -0.34 -0.48 0.32 0.23 1.03
- - - - - - - - - - - - -1.42 4.11 0.68 -2.94 -3.06 2.92 - - - - 0.33 - - - - - -2.99 - 1.35
-1.91 -1.66 -1.49 -1.72 -0.32 -0.95 -1.48 -2.41 -0.92 -0.52 -0.71 -0.71 1.36 2.33 0.73 -0.25 -0.13 1.38 -0.99 -0.63 -0.98 -0.78 -1.06 -0.53 -0.33 -1.0 -0.59 -0.94 0.5 0.38 1.7
-0.64 0.16 -0.76 -0.56 -0.43 -0.28 -0.15 -0.53 -0.03 0.11 0.12 -0.52 1.21 1.64 1.1 -0.28 -1.11 0.43 -0.31 -0.99 -1.67 -0.67 -0.18 -0.47 -0.67 -0.88 -0.93 -0.32 0.0 -0.31 1.38
-1.48 -0.75 -0.85 -0.92 -0.07 -0.49 -0.1 -0.37 -0.38 -0.26 -0.29 -0.22 -0.0 0.88 1.05 0.24 0.47 1.58 0.29 -0.02 -0.33 -0.53 -0.59 -0.02 -0.25 -0.37 -0.17 -0.8 -0.2 0.13 0.58
- -1.07 -1.25 -1.49 0.19 -0.39 -1.06 -0.88 -0.01 -0.02 0.07 0.12 0.19 1.93 0.92 -0.55 -1.09 0.81 0.08 -0.08 -0.87 -1.26 -2.47 -0.27 -0.44 -0.66 -1.04 -1.07 1.15 1.01 1.26
-2.41 -3.38 -1.95 -1.83 -1.03 -1.24 -1.56 -1.88 -1.5 -1.48 -1.22 -0.77 2.53 2.84 0.72 -1.16 -1.23 0.52 -1.91 -2.31 -2.22 -1.27 -1.55 -0.66 -1.07 -1.58 -2.49 -0.97 -1.03 -0.63 2.42
-1.38 -1.27 -1.57 -1.23 -0.21 0.06 -0.36 -0.55 -0.3 -0.37 -0.28 -1.01 -1.05 1.38 1.28 0.28 -0.07 1.73 0.25 -0.21 -0.31 -0.23 0.43 -0.42 -0.38 -0.28 -0.18 -0.76 0.19 0.18 0.05
-2.23 -2.92 -1.6 -1.18 -1.14 -0.63 - -1.39 -0.67 -0.38 -3.91 -1.96 0.88 2.65 0.46 -1.43 -0.48 2.37 -0.5 -1.72 -0.22 -1.19 - 0.09 -0.48 -1.1 0.64 -2.52 -0.63 -0.49 1.72
-1.26 -1.11 -0.64 -0.71 0.15 0.03 -0.82 -0.8 -0.78 -0.65 -0.89 -0.64 1.33 1.97 0.58 -0.31 -0.4 0.72 -0.19 -0.64 -0.64 -0.6 -0.03 -1.2 -0.77 -0.43 -0.67 -0.58 0.21 0.22 1.51
-0.02 -0.57 0.33 -0.08 -0.46 0.01 -0.35 -1.06 -0.6 -0.51 -0.54 -0.36 0.31 1.62 0.79 -0.04 0.1 1.4 0.18 -0.32 -0.5 -0.14 -1.02 -0.34 -0.36 -0.32 -0.4 -0.12 -0.63 -0.71 0.29
-1.02 -2.85 -1.16 -2.55 -0.39 -0.01 -0.59 -0.42 -0.9 -0.53 -0.65 0.58 1.98 1.09 1.05 -0.07 0.08 0.79 0.07 -0.13 -0.77 -0.13 -2.43 -0.19 -0.62 -0.66 -1.69 -0.24 -0.81 -0.68 1.67
-0.79 -1.07 -0.23 -0.45 0.2 0.13 -0.59 -0.63 -0.33 -0.37 -0.22 -0.27 0.75 1.28 0.77 0.18 -0.09 0.76 -0.34 -0.39 -0.58 -0.51 -0.47 -0.39 -0.32 -0.06 -0.19 -0.33 0.16 0.23 0.88
-0.39 -0.31 -0.66 -0.97 0.22 0.05 -0.55 -0.57 -0.67 -0.68 -0.64 -0.58 0.87 1.42 0.85 -0.07 -0.14 1.19 0.03 -0.72 -0.23 -0.21 -2.14 -0.4 -0.27 -0.19 -0.14 -0.34 0.02 -0.02 1.0
-1.98 -3.43 -2.86 -4.49 0.37 0.71 -0.37 -0.47 -0.93 -2.31 -1.92 -1.24 1.3 2.13 1.68 -0.53 -0.59 1.36 0.78 -0.76 -0.11 -0.73 -1.93 0.05 -0.53 -0.91 -1.37 -0.72 -1.19 -0.85 1.21
-0.44 -0.44 -0.52 -0.87 0.26 0.58 -1.0 -1.18 -0.48 -0.38 -0.48 -0.63 0.82 1.38 1.08 0.03 -0.06 0.67 -0.48 -0.16 -0.56 -0.05 -0.56 0.16 -0.39 -0.88 -0.35 -0.72 -0.23 0.32 0.93
-3.97 -0.89 - - 0.25 -0.4 -1.69 -1.58 -3.0 -3.52 -4.29 - -1.67 3.45 1.39 -2.55 -0.65 2.46 0.56 -2.34 -2.09 -0.96 -1.21 -1.39 -1.53 -1.29 -0.86 -2.26 0.01 -1.26 0.24
-0.63 -0.56 -1.49 -1.88 -0.46 -0.03 0.29 0.48 -0.56 -0.49 -0.43 -0.44 0.0 1.34 1.03 0.08 0.12 1.61 0.32 -0.14 -0.39 -0.47 -0.25 -0.18 -0.43 -0.48 -0.44 -0.35 -0.23 -0.12 -0.06
-0.93 -1.23 -1.24 -1.84 -0.81 -0.89 -0.95 -1.71 -1.08 -1.24 -0.83 -0.72 2.14 2.95 0.77 -0.9 -0.61 1.13 -1.59 -1.41 -1.38 -1.45 -2.82 -0.45 -0.51 -0.87 -1.25 -0.56 -1.56 -0.87 1.36
-0.44 0.26 0.41 -0.01 0.53 0.26 -1.05 -1.13 -0.5 -0.18 -0.22 -0.32 0.32 1.22 0.76 0.07 -0.19 0.49 -0.12 -0.39 -0.7 -0.01 0.79 -0.53 -0.71 -0.39 -0.14 -0.57 -0.31 -0.36 0.1
-4.08 -0.86 -0.88 -1.1 -0.86 -1.64 -1.45 -1.39 -1.25 -0.5 -0.32 -0.92 1.76 2.05 -0.41 -1.03 -0.72 0.56 -0.78 -0.21 -1.37 -0.14 -1.65 0.03 0.04 -0.6 -0.71 -1.87 -0.91 -0.11 2.66
-0.75 -1.33 -1.28 -1.41 -2.09 -2.25 -1.15 -0.87 -1.1 -0.51 -1.0 -0.41 1.55 2.2 0.32 -0.86 -0.07 1.55 -0.28 -1.71 -1.08 -1.79 -0.17 -1.26 -1.28 -1.47 -1.03 -0.86 -0.72 0.02 2.46
- - - - - - - - - - - - - 3.75 - - - 3.42 - 2.08 - - 1.36 - - - - - - - -
-1.13 -2.76 -3.25 - -0.23 0.26 0.76 0.97 -1.53 -2.42 -1.66 -1.77 1.87 2.36 0.75 -0.71 -1.31 1.06 -0.38 0.12 -1.01 -0.39 -1.07 -0.49 -0.81 -2.13 -1.28 0.37 -0.79 -0.44 0.81
-0.98 -0.83 -1.1 -1.11 0.2 0.28 -0.29 -0.54 -0.07 -0.0 -0.12 -0.07 1.32 0.68 0.39 -0.08 0.01 0.15 -0.07 -0.05 -0.19 -0.05 -0.67 -0.24 -0.18 -0.03 0.05 -0.11 -0.1 -0.13 0.94
- - - - 0.23 -1.68 - -1.75 - - - - -0.37 3.65 - -0.49 - 3.37 - 0.2 - - - - 1.47 - - - - - -0.09
- - - - 0.78 - - - - - - - - 3.75 1.04 - - 2.81 - - -1.33 - -0.99 -0.12 - - - - 1.18 - 1.44
- - - -1.57 -0.8 -1.89 -2.26 -2.41 -1.42 -1.95 - -2.53 1.49 3.61 0.89 - -2.42 1.42 0.12 -1.65 - -1.64 -0.04 0.59 -2.49 - - -1.36 -1.89 -2.56 1.86
-1.79 -0.44 -0.49 -0.6 0.23 0.13 -0.44 -0.55 -0.11 0.09 -0.16 -0.34 0.59 1.35 0.61 -0.18 -0.34 0.82 0.2 -0.07 -0.39 -0.74 -2.0 -0.54 -0.39 -0.17 -0.65 -0.81 0.46 0.42 1.17
-1.15 0.43 -0.62 -0.97 -0.77 -0.17 -1.1 -0.86 -0.51 -0.62 -0.69 -0.8 2.01 1.07 0.62 -0.18 -0.26 1.38 -0.34 -0.33 -0.94 -0.64 -1.24 -0.47 -0.45 -0.52 -0.62 -1.07 -0.36 -0.16 1.53
-0.2 -0.64 0.01 -0.19 0.52 0.62 -0.78 -1.15 -0.54 -0.54 -0.52 -0.99 0.56 1.77 1.06 -0.08 -0.24 1.36 -0.41 -0.42 -0.61 -0.95 0.07 -1.0 -0.8 -0.78 -0.29 -0.85 -0.46 -0.59 0.64
- -4.39 - - -0.7 -0.82 - -2.93 - - - - -3.58 3.36 2.41 -1.27 -2.7 3.43 -0.31 -4.75 -2.87 -1.69 -4.63 -3.12 - -4.66 -4.86 -2.62 -1.51 -3.71 -1.02
-0.26 -0.76 -0.03 -0.17 -0.23 -0.21 -0.66 -1.16 -0.32 -0.21 -0.4 -0.35 0.07 1.59 1.02 0.11 0.03 1.25 0.25 0.24 -0.36 -0.38 -1.87 -0.43 -0.53 -0.43 -0.23 -1.01 -0.44 -0.06 0.8
-0.55 -1.12 -0.66 -0.2 0.07 -0.02 -0.47 -0.13 -0.5 -0.31 -0.38 -0.1 0.44 1.29 0.5 -0.09 -0.08 0.62 -0.34 -0.38 -0.37 -0.21 -0.33 -0.24 -0.33 -0.38 -0.43 -0.24 0.47 0.33 1.13
-1.91 -2.36 -4.36 -3.03 -0.4 -0.31 -1.76 -1.9 -1.31 -2.41 -1.86 -2.35 -0.15 3.3 1.2 -2.2 -1.38 2.61 -0.05 -2.02 -0.94 -1.36 -0.65 0.01 -0.83 -0.98 -1.43 -1.23 -0.74 -0.9 -0.68
-0.99 -1.2 -1.2 -1.89 -0.7 -0.44 -0.57 -0.87 -1.03 -0.92 -0.92 -0.6 2.6 1.3 0.03 -0.47 -0.07 1.54 -0.69 -0.62 -0.97 -0.78 -2.7 -0.23 -0.31 -0.37 -0.53 -0.36 -0.87 -0.45 1.46
-1.69 -1.84 -2.4 -1.96 -0.48 -0.47 -1.08 -0.85 -1.2 -1.2 -1.07 -0.42 2.55 1.84 0.99 -0.56 -0.76 1.31 -0.83 -0.9 -1.15 -0.63 -3.98 -0.48 -0.68 -0.91 -1.28 -0.83 -0.87 -0.26 1.91
-0.98 -2.37 -1.31 -4.81 -1.01 -0.87 -0.97 -1.72 -0.99 -0.24 -0.87 -1.2 1.92 3.12 -0.02 -1.04 -0.39 0.41 -2.47 -1.01 -0.71 -0.44 -1.59 -0.15 -0.23 -1.77 -1.26 -0.33 -1.46 -0.43 1.55
-1.96 - -3.02 -3.04 -0.3 -2.35 -2.76 - -0.35 -3.23 0.04 -0.27 1.17 2.76 1.23 -3.15 0.05 1.53 -1.41 -0.88 -1.46 0.26 -2.19 -0.79 0.06 -0.82 -3.32 -1.14 1.0 -0.32 1.57
- - - - - -2.96 -0.92 -2.12 - -2.04 - - 2.78 3.07 1.43 -2.57 -2.99 0.23 0.29 -2.21 -2.23 - - -2.03 -1.41 - -2.79 -2.92 -3.01 -2.12 2.92
- - - - - - - - - - - - - 3.74 - - - 4.14 - - - - - - - - - - - - -
-0.66 -2.38 -0.71 -0.94 0.14 -0.69 -1.05 -2.05 -0.49 -0.36 -0.61 -0.05 -0.05 1.34 0.85 -0.28 0.29 1.77 -0.29 -0.55 -0.27 -0.6 -0.23 -0.71 0.23 -0.21 -0.01 -1.1 -0.05 0.65 1.17

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.