Lsat_1_v5_gn_1_29241.1 (EF1Bb, eEF-1Bb1)

Aliases : EF1Bb, eEF-1Bb1

Description : component *(eEF1B-beta/-delta) of eEF1B eEF1A-GDP-recycling complex

Gene families : OG0005540 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005540_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_29241.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_132

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000491	small nucleolar ribonucleoprotein complex assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000492	box C/D snoRNP assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004832	valine-tRNA ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005778	peroxisomal membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006082	organic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006351	DNA-templated transcription	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006400	tRNA modification	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006438	valyl-tRNA aminoacylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006520	amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007031	peroxisome organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008168	methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008175	tRNA methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022618	protein-RNA complex assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030880	RNA polymerase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031123	RNA 3'-end processing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031124	mRNA 3'-end processing	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0031903	microbody membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042393	histone binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071826	protein-RNA complex organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR014038	EF1B_bsu/dsu_GNE	142	229

External Links

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Lsat_1_v5_gn_1_29241.1 (EF1Bb, eEF-1Bb1)

Expression Profile

Co-expression Networks

Functional Annotation