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Description : not classified
Gene families : OG0025681 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra004350 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_99 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0017038 | protein import | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043687 | post-translational protein modification | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0101005 | deubiquitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1990234 | transferase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046848 | E_motif | 557 | 617 |
| IPR002885 | Pentatricopeptide_rpt | 513 | 536 |
| IPR002885 | Pentatricopeptide_rpt | 73 | 88 |
| IPR002885 | Pentatricopeptide_rpt | 412 | 434 |
| IPR002885 | Pentatricopeptide_rpt | 105 | 134 |
| IPR002885 | Pentatricopeptide_rpt | 438 | 485 |
| IPR002885 | Pentatricopeptide_rpt | 336 | 384 |
| IPR002885 | Pentatricopeptide_rpt | 235 | 282 |
| IPR032867 | DYW_dom | 653 | 745 |
| No external refs found! |