1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_1_19021.1

Lsat_1_v5_gn_1_19021.1


Description : not classified


Gene families : OG0000423 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000423_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_19021.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_3_5660.1 PATROL1 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_4_95640.1 PATROL1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048364 root development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048731 system development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!