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  5. Lsat_1_v5_gn_1_10500.1

Lsat_1_v5_gn_1_10500.1 (EMB3003)


Aliases : EMB3003

Description : dihydrolipoamide acetyltransferase component of plastidial pyruvate dehydrogenase complex. EC_2.3 acyltransferase


Gene families : OG0003291 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003291_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_10500.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Bra028057 EMB3003 EC_2.3 acyltransferase. dihydrolipoamide... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004655 porphobilinogen synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004834 tryptophan synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006568 tryptophan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006586 indolalkylamine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016872 intramolecular lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042430 indole-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042586 peptide deformylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000089 Biotin_lipoyl 41 112
IPR004167 PSBD 182 217
IPR001078 2-oxoacid_DH_actylTfrase 249 466
No external refs found!