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  5. Bra040932

Bra040932 (ATEXP6, ATHEXP ALPHA...)


Aliases : ATEXP6, ATHEXP ALPHA 1.8, ATEXPA6, EXPA6

Description : alpha-class expansin


Gene families : OG0006540 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra040932
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_175


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004089 carbonate dehydratase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004109 coproporphyrinogen oxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004807 triose-phosphate isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005544 calcium-dependent phospholipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006633 fatty acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006817 phosphate ion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009536 plastid IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015698 inorganic anion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 148 225
IPR009009 RlpA-like_DPBB 72 137
No external refs found!