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Aliases : ATG8F
Description : autophagosome ubiquitin-fold protein *(ATG8)
Gene families : OG0005977 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra040738 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_148 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bra012710 | ATG8F | autophagosome ubiquitin-fold protein *(ATG8) | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004620 | phospholipase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004629 | phospholipase C activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016298 | lipase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016311 | dephosphorylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022900 | electron transport chain | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030880 | RNA polymerase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042887 | amide transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1904680 | peptide transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004241 | Atg8-like | 14 | 117 |
| No external refs found! |