Bra040708

Description : not classified

Gene families : OG0022624 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra040708
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_211

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006606	protein import into nucleus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006913	nucleocytoplasmic transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006914	autophagy	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016409	palmitoyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033365	protein localization to organelle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034504	protein localization to nucleus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051169	nuclear transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051170	import into nucleus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	129	302
IPR001650	Helicase_C	337	448

External Links

No external refs found!