Bra040225 (MEE32, EMB3004)


Aliases : MEE32, EMB3004

Description : 3-dehydroquinate dehydratase and shikimate dehydrogenase


Gene families : OG0007219 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra040225
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_265


Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA Interproscan
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR013708 Shikimate_DH-bd_N 319 399
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 442 517
IPR001381 DHquinase_I 88 305
IPR041121 SDH_C 563 586
No external refs found!