Aliases : EMB2296
Description : component *(uL2) of large ribosomal-subunit (LSU) proteome
Gene families : OG0000375 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000375_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra039911 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_94 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bra010550 | No alias | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Bra011664 | EMB2296 | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Lsat_1_v5_gn_5_4380.1 | EMB2296 | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Lsat_1_v5_gn_9_94880.1 | EMB2296 | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Mp7g01860.1 | EMB2296 | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Mp7g08730.1 | EMB2296 | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.00337 | No alias | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.00075 | No alias | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003676 | nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003723 | RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006334 | nucleosome assembly | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006479 | protein methylation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0008213 | protein alkylation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016570 | histone modification | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016571 | histone methylation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0018024 | obsolete histone lysine N-methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0019843 | rRNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0031267 | small GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0034728 | nucleosome organization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0034968 | histone lysine methylation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043414 | macromolecule methylation | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0051020 | GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0097159 | organic cyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:1901363 | heterocyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
No external refs found! |