Bra039504 (SK18, ASK18)

Aliases : SK18, ASK18

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes

Gene families : OG0022610 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra039504
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_246

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0000077	DNA damage checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0001671	ATPase activator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0001932	regulation of protein phosphorylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004834	tryptophan synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005261	monoatomic cation channel activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005743	mitochondrial inner membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006568	tryptophan metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006576	biogenic amine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006586	indolalkylamine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006848	pyruvate transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008037	cell recognition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009072	aromatic amino acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010564	regulation of cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010948	negative regulation of cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015252	proton channel activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015711	organic anion transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015718	monocarboxylic acid transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015849	organic acid transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0019866	organelle inner membrane	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019900	kinase binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019901	protein kinase binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030896	checkpoint clamp complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0031570	DNA integrity checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042325	regulation of phosphorylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042430	indole-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042770	signal transduction in response to DNA damage	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043248	proteasome assembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043549	regulation of kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045786	negative regulation of cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045859	regulation of protein kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046942	carboxylic acid transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0051087	protein-folding chaperone binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051338	regulation of transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0060590	ATPase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901475	pyruvate transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1903825	organic acid transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR016072	Skp1_comp_dimer	121	167
IPR016073	Skp1_comp_POZ	17	75

External Links

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Bra039504 (SK18, ASK18)

Expression Profile

Co-expression Networks

Functional Annotation