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  5. Bra038757

Bra038757 (ATML1)


Aliases : ATML1

Description : HD-ZIP IV-type transcription factor


Gene families : OG0001960 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra038757
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Bra013556 ATML1 HD-ZIP IV-type transcription factor 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0001932 regulation of protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019220 regulation of phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019900 kinase binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019901 protein kinase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031399 regulation of protein modification process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042325 regulation of phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043549 regulation of kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045859 regulation of protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051174 regulation of phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051338 regulation of transferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051726 regulation of cell cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 63 118
IPR002913 START_lipid-bd_dom 234 452
No external refs found!