- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified
Gene families : OG0007242 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra037764 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_62 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bra024270 | No alias | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004650 | polygalacturonase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007165 | signal transduction | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007264 | small GTPase mediated signal transduction | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007265 | Ras protein signal transduction | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007266 | Rho protein signal transduction | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030695 | GTPase regulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006760 | Endosulphine | 22 | 92 |
| No external refs found! |