Bra037680

Description : EC_3.2 glycosylase

Gene families : OG0008350 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra037680
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_161

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004519	endonuclease activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004521	RNA endonuclease activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004540	RNA nuclease activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007265	Ras protein signal transduction	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007266	Rho protein signal transduction	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	253	475
IPR024535	Pectate_lyase_SF_prot	35	248

External Links

No external refs found!