1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra036881

Bra036881 (ATAMY1, AMY1)


Aliases : ATAMY1, AMY1

Description : alpha amylase


Gene families : OG0026665 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra036881
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_567


Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008417 fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042546 cell wall biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 14 173
IPR012850 A-amylase_bs_C 328 386
No external refs found!