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Heatmap: Cluster_567 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra008850 (SAG29)
 -3.43 -4.72 -3.51 -2.55 -0.67 1.35 0.19 -3.01 -1.19 -3.14 -3.15 -1.26 1.36 0.78 1.17 -0.89 -1.19 -1.73 -0.92 -0.34 -2.43 0.14 3.62 -0.34 -0.94 -3.06 -1.52 -2.88 -2.71 -5.86 -1.6
Bra014180 (USPL1)
 -0.97 -0.11 0.2 -0.43 0.36 -0.18 0.09 -0.76 -1.02 -0.47 -0.83 -0.46 0.41 -0.61 0.64 0.27 -1.38 0.72 -0.16 -0.32 -1.06 0.32 3.0 -1.79 -0.74 -1.48 -0.84 -3.2 - -0.7 -0.64
Bra036881 (AMY1)
 -1.37 -2.01 -2.01 -2.87 -0.22 0.29 -1.17 -2.01 -0.43 -0.12 0.03 -0.13 -0.25 1.16 1.02 0.03 -0.01 0.19 0.03 -0.64 -0.15 -0.52 2.82 -0.48 -0.6 -0.6 -0.54 -0.76 -0.5 -1.14 -0.92

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.