Bra036754

Description : not classified

Gene families : OG0004963 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004963_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra036754
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_211

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004540	RNA nuclease activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005739	mitochondrion	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008535	respiratory chain complex IV assembly	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016859	cis-trans isomerase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0017004	cytochrome complex assembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033108	mitochondrial respiratory chain complex assembly	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033617	mitochondrial cytochrome c oxidase assembly	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0120227	acyl-CoA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1901567	fatty acid derivative binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR019191	Essential_protein_Yae1_N	140	177
IPR011666	DUF1604	39	75

External Links

No external refs found!

Bra036754

Expression Profile

Co-expression Networks

Functional Annotation