- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : AtTic20-II, Tic20-II
Description : not classified
Gene families : OG0029627 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra036539 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_178 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004525 | ribonuclease III activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006260 | DNA replication | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016891 | RNA endonuclease activity, producing 5'-phosphomonoesters | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0034061 | DNA polymerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051082 | unfolded protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005691 | Tic20 | 28 | 192 |
| No external refs found! |