Bra036234


Description : translation elongation factor *(EF-Tu)


Gene families : OG0014595 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra036234
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_151


Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000120 RNA polymerase I transcription regulator complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004797 thymidine kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006188 IMP biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006360 transcription by RNA polymerase I IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0010181 FMN binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016842 amidine-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019136 deoxynucleoside kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019206 nucleoside kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0033588 elongator holoenzyme complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034504 protein localization to nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043226 organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046040 IMP metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061608 nuclear import signal receptor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0090730 Las1 complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902555 endoribonuclease complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905348 endonuclease complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 359 452
IPR004161 EFTu-like_2 283 353
IPR000795 T_Tr_GTP-bd_dom 66 259
No external refs found!