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Description : light-responsive regulatory protein *(SEP4)
Gene families : OG0010579 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra034761 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_241 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bra007359 | No alias | light-responsive regulatory protein *(SEP4) | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003747 | translation release factor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005509 | calcium ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006066 | alcohol metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006415 | translational termination | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006553 | lysine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006605 | protein targeting | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008079 | translation termination factor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010206 | photosystem II repair | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019751 | polyol metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022411 | cellular component disassembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0030091 | protein repair | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034311 | diol metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034312 | diol biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046173 | polyol biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046434 | organophosphate catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0047952 | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0050497 | alkylthioltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0052646 | alditol phosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0098809 | nitrite reductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1990204 | oxidoreductase complex | IEP | Brassica rapa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |