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  5. Bra034683

Bra034683


Description : DNA bending architectural protein *(HMG-B)


Gene families : OG0003901 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003901_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra034683
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_137


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005839 proteasome core complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006650 glycerophospholipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016307 obsolete phosphatidylinositol phosphate kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019239 deaminase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046486 glycerolipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051259 protein complex oligomerization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 218 283
IPR001606 ARID_dom 38 121
No external refs found!