Bra034343

Description : not classified

Gene families : OG0030036 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra034343
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_70

Type	GO Term	Name	Evidence	Source
BP	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0043484	regulation of RNA splicing	None	Extended
BP	GO:0048024	regulation of mRNA splicing, via spliceosome	None	Extended
BP	GO:0050684	regulation of mRNA processing	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903311	regulation of mRNA metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004402	histone acetyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006352	DNA-templated transcription initiation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006473	protein acetylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006475	internal protein amino acid acetylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008080	N-acetyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016407	acetyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016410	N-acyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016573	histone acetylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018193	peptidyl-amino acid modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018205	peptidyl-lysine modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030880	RNA polymerase complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043543	protein acylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043687	post-translational protein modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140993	histone modifying activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1990234	transferase complex	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR018612	NSRP1_N	53	169

External Links

No external refs found!

Bra034343

Expression Profile

Co-expression Networks

Functional Annotation