Bra003330 (RTM3)


Aliases : RTM3

Description : not classified


Gene families : OG0003147 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003147_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra003330
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_78


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005337 nucleoside transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006308 DNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006810 transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009092 homoserine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010167 response to nitrate IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015706 nitrate transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015858 nucleoside transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019346 transsulfuration IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050667 homocysteine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098661 inorganic anion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901642 nucleoside transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901698 response to nitrogen compound IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902025 nitrate import IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 194 304
IPR002083 MATH/TRAF_dom 13 128
No external refs found!