1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra032659

Bra032659 (BIG3, EDA10)


Aliases : BIG3, EDA10

Description : ARF-GTPase guanyl-nucleotide exchange factor *(BIG)


Gene families : OG0002249 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002249_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra032659
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_7_7460.1 BIG2 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA Interproscan
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005247 voltage-gated chloride channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005253 monoatomic anion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005254 chloride channel activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006497 protein lipidation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006505 GPI anchor metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006506 GPI anchor biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006650 glycerophospholipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006664 glycolipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006810 transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006820 monoatomic anion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006821 chloride transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009247 glycolipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015108 chloride transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015698 inorganic anion transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022832 voltage-gated channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022839 monoatomic ion gated channel activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045017 glycerolipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046467 membrane lipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046474 glycerophospholipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Brassica rapa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901702 salt transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1903509 liposaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046455 Sec7/BIG1-like_C 1548 1740
IPR032691 Mon2/Sec7/BIG1-like_HUS 340 495
IPR015403 Mon2/Sec7/BIG1-like_HDS 1160 1242
IPR032629 DCB_dom 7 213
IPR000904 Sec7_dom 612 793
IPR032817 Mon2_C 1334 1395
No external refs found!