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  5. Bra003260

Bra003260 (bHLH39, ORG3, BHLH039)


Aliases : bHLH39, ORG3, BHLH039

Description : bHLH-Ib-class transcriptional regulator of copper/iron homeostasis. bHLH-type transcription factor


Gene families : OG0000472 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra003260
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_78


Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004451 isocitrate lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005337 nucleoside transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005811 lipid droplet IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006633 fatty acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006810 transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0012511 monolayer-surrounded lipid storage body IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015858 nucleoside transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016833 oxo-acid-lyase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032940 secretion by cell IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046903 secretion IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Brassica rapa GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140352 export from cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901642 nucleoside transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901981 phosphatidylinositol phosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011598 bHLH_dom 68 119
No external refs found!