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  5. Bra032254

Bra032254 (ICU9, AGO1, AtAGO1)


Aliases : ICU9, AGO1, AtAGO1

Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly


Gene families : OG0006361 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra032254
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0003.00084 ICU9, AGO1, AtAGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004864 protein phosphatase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006621 protein retention in ER lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008375 acetylglucosaminyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010921 regulation of phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016778 diphosphotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019212 phosphatase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019220 regulation of phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031399 regulation of protein modification process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032507 maintenance of protein location in cell IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035303 regulation of dephosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035304 regulation of protein dephosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045185 maintenance of protein location IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046923 ER retention sequence binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051174 regulation of phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051336 regulation of hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR014811 ArgoL1 397 447
IPR003100 PAZ_dom 474 578
IPR024357 Argonaut_Gly-rich 142 232
IPR032472 ArgoL2 589 635
IPR032474 Argonaute_N 250 385
IPR032473 Argonaute_Mid_dom 646 721
IPR003165 Piwi 739 1058
No external refs found!