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  5. Bra031472

Bra031472 (TMN1, AtTMN1, EMP12)


Aliases : TMN1, AtTMN1, EMP12

Description : not classified


Gene families : OG0000615 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra031472
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_5_105780.1 TMN1, AtTMN1, EMP12 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01444 TMN1, AtTMN1, EMP12 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004559 alpha-mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005488 binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005778 peroxisomal membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006665 sphingolipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006672 ceramide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006904 vesicle docking involved in exocytosis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008375 acetylglucosaminyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016559 peroxisome fission IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022406 membrane docking IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030119 AP-type membrane coat adaptor complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030131 clathrin adaptor complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031903 microbody membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0035145 exon-exon junction complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048278 vesicle docking IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051259 protein complex oligomerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051260 protein homooligomerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051640 organelle localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140029 exocytic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140056 organelle localization by membrane tethering IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004240 EMP70 58 545
No external refs found!