1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra031229

Bra031229


Description : not classified


Gene families : OG0029567 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra031229
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_99


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000152 nuclear ubiquitin ligase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000159 protein phosphatase type 2A complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005680 anaphase-promoting complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032867 DYW_dom 701 793
IPR002885 Pentatricopeptide_rpt 322 343
IPR002885 Pentatricopeptide_rpt 81 109
IPR002885 Pentatricopeptide_rpt 560 585
IPR002885 Pentatricopeptide_rpt 384 411
IPR002885 Pentatricopeptide_rpt 188 214
IPR002885 Pentatricopeptide_rpt 53 76
IPR002885 Pentatricopeptide_rpt 356 382
IPR002885 Pentatricopeptide_rpt 112 139
IPR002885 Pentatricopeptide_rpt 247 275
IPR046848 E_motif 603 665
IPR002885 Pentatricopeptide_rpt 486 532
No external refs found!