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  5. Bra030262

Bra030262 (CSI1, POM2)


Aliases : CSI1, POM2

Description : cellulose synthase CSC-interactive protein *(CSI)


Gene families : OG0002245 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra030262
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_236

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_4_139981.1 CSI1, POM2 cellulose synthase CSC-interactive protein *(CSI) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01322 CSI1, POM2 cellulose synthase CSC-interactive protein *(CSI) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003997 acyl-CoA oxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006635 fatty acid beta-oxidation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009062 fatty acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019395 fatty acid oxidation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030258 lipid modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034440 lipid oxidation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044242 cellular lipid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072329 monocarboxylic acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000008 C2_dom 2036 2128
IPR000225 Armadillo 527 565
No external refs found!