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  5. Bra029958

Bra029958 (ATCNGC19, CNGC19)


Aliases : ATCNGC19, CNGC19

Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG0000890 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000890_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra029958
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Bra031529 CNGC20, ATCNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0120227 acyl-CoA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 167 414
No external refs found!